Journal Of Theoretical Biology

Journal Of Theoretical Biology

理论生物学杂志

  • 4区 中科院分区
  • Q2 JCR分区

高引用文章

文章名称 引用次数
Identification of protein subcellular localization via integrating evolutionary and physicochemical information into Chou's general PseAAC 42
Identifying 5-methylcytosine sites in RNA sequence using composite encoding feature into Chou's PseKNC 27
SPrenylC-PseAAC: A sequence-based model developed via Chou's 5-steps rule and general PseAAC for identifying S-prenylation sites in proteins 26
iMethyl-STTNC: Identification of N-6-methyladenosine sites by extending the idea of SAAC into Chou's PseAAC to formulate RNA sequences 24
Self-binding peptides: Binding-upon-folding versus folding-upon-binding 23
iRNA-PseKNC(2methyl): Identify RNA 2 '-O-methylation sites by convolution neural network and Chou's pseudo components 21
Mathematical modeling of tumor-immune cell interactions 18
Predicting protein submitochondrial locations by incorporating the pseudo-position specific scoring matrix into the general Chou's pseudo-amino acid composition 17
DPP-PseAAC: A DNA-binding protein prediction model using Chou's general PseAAC 17
iMem-2LSAAC: A two-level model for discrimination of membrane proteins and their types by extending the notion of SAAC into chou's pseudo amino acid composition 16
PREvaIL, an integrative approach for inferring catalytic residues using sequence, structural, and network features in a machine-learning framework 16
Optimal control to develop therapeutic strategies for metastatic castrate resistant prostate cancer 16
Is the cell really a machine? 16
To vaccinate or not to vaccinate: A comprehensive study of vaccination-subsidizing policies with multi-agent simulations and mean-field modeling 16
pLoc_bal-mGneg: Predict subcellular localization of Gram-negative bacterial proteins by quasi-balancing training dataset and general PseAAC 16
Feature selection and tumor classification for microarray data using relaxed Lasso and generalized multi-class support vector machine 15
iPPI-PseAAC(CGR): Identify protein-protein interactions by incorporating chaos game representation into PseAAC 15
The fossilized birth-death model for the analysis of stratigraphic range data under different speciation modes 14
pSSbond-PseAAC: Prediction of disulfide bonding sites by integration of PseAAC and statistical moments 14
Theoretical minimal RNA rings recapitulate the order of the genetic code's codon-amino acid assignments 13
Magnetohydrodynamic bioconvective flow of Williamson nanofluid containing gyrotactic microorganisms subjected to thermal radiation and Newtonian conditions 13
Prediction of protein subcellular localization with oversampling approach and Chou's general PseAAC 12
Mathematical model of immune response to hepatitis B 12
Predicting protein-protein interactions by fusing various Chou's pseudo components and using wavelet denoising approach 12
Prediction of RNA-protein interactions by combining deep convolutional neural network with feature selection ensemble method 12
Identifying essential proteins based on sub-network partition and prioritization by integrating subcellular localization information 12
MFSC: Multi-voting based feature selection for classification of Golgi proteins by adopting the general form of Chou's PseAAC components 11
A mathematical model of antibody-dependent cellular cytotoxicity (ADCC) 11
Free-energy minimization in joint agent-environment systems: A niche construction perspective 11
Asymmetric evolutionary games with environmental feedback 11
dForml(KNN)-PseAAC: Detecting formylation sites from protein sequences using K-nearest neighbor algorithm via Chou's 5-step rule and pseudo components 11
What does not kill a tumour may make it stronger: In silico insights into chemotherapeutic drug resistance 11
Fu-SulfPred: Identification of Protein S-sulfenylation Sites by Fusing Forests via Chou's General PseAAC 11
Predicting apoptosis protein subcellular localization by integrating auto-cross correlation and PSSM into Chou's PseAAC 11
Predicting membrane protein types by incorporating a novel feature set into Chou's general PseAAC 10
A coupled bulk-surface model for cell polarisation 10
Niche emergence as an autocatalytic process in the evolution of ecosystems 10
Modelling skin wound healing angiogenesis: A review 10
How ecosystems recover from pulse perturbations: A theory of short- to long-term responses 10
Prediction of antioxidant proteins by incorporating statistical moments based features into Chou's PseAAC 10
Modeling the 2016-2017 Yemen cholera outbreak with the impact of limited medical resources 10
Analysis and prediction of animal toxins by various Chou's pseudo components and reduced amino acid compositions 9
Assessing the efficiency of Wolbachia driven Aedes mosquito suppression by delay differential equations 9
Using Chou's general PseAAC to analyze the evolutionary relationship of receptor associated proteins (RAP) with various folding patterns of protein domains 9
Mathematical model and intervention strategies for mitigating tuberculosis in the Philippines 9
Group size effects in social evolution 9
NucPosPred: Predicting species-specific genomic nucleosome positioning via four different modes of general PseKNC 9
Reentrainment of the circadian pacemaker during jet lag: East-west asymmetry and the effects of north-south travel 9
A guideline to study the feasibility domain of multi-trophic and changing ecological communities 8
Mathematical models for chemotaxis and their applications in self-organisation phenomena 8