| Ensembl variation resources |
85 |
| CircR2Disease: a manually curated database for experimentally supported circular RNAs associated with various diseases |
31 |
| PanglaoDB: a web server for exploration of mouse and human single-cell RNA sequencing data |
24 |
| CircFunBase: a database for functional circular RNAs |
15 |
| TISSUES 2.0: an integrative web resource on mammalian tissue expression |
11 |
| LnChrom: a resource of experimentally validated lncRNA-chromatin interactions in human and mouse |
11 |
| APID database: redefining protein-protein interaction experimental evidences and binary interactomes |
10 |
| Extracting chemical-protein relations with ensembles of SVM and deep learning models |
9 |
| Identification of tRNA-derived ncRNAs in TCGA and NCI-60 panel cell lines and development of the public database tRFexplorer |
7 |
| DeepScreening: a deep learning-based screening web server for accelerating drug discovery |
7 |
| GrainGenes: centralized small grain resources and digital platform for geneticists and breeders |
7 |
| PubMed Labs: an experimental system for improving biomedical literature search |
7 |
| Phytochelatin database: a resource for phytochelatin complexes of nutritional and environmental metals |
6 |
| miRwayDB: a database for experimentally validated microRNA-pathway associations in pathophysiological conditions |
6 |
| Fungal Stress Database (FSD)-a repository of fungal stress physiological data |
6 |
| Tripal v3: an ontology-based toolkit for construction of FAIR biological community databases |
6 |
| LPTK: a linguistic pattern-aware dependency tree kernel approach for the BioCreative VI CHEMPROT task |
6 |
| dbDEPC 3.0: the database of differentially expressed proteins in human cancer with multi-level annotation and drug indication |
6 |
| LIVE: a manually curated encyclopedia of experimentally validated interactions of lncRNAs |
6 |
| LncCeRBase: a database of experimentally validated human competing endogenous long non-coding RNAs |
6 |
| CBD: a biomarker database for colorectal cancer |
6 |
| dbAMEPNI: a database of alanine mutagenic effects for protein-nucleic acid interactions |
6 |
| Growing and cultivating the forest genomics database, TreeGenes |
6 |
| PKAD: a database of experimentally measured pKa values of ionizable groups in proteins |
6 |
| Drug Target Commons 2.0: a community platform for systematic analysis of drug target interaction profiles |
6 |
| AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture |
6 |
| OliveNet (TM): a comprehensive library of compounds from Olea europaea |
5 |
| Extracting chemical-protein interactions from literature using sentence structure analysis and feature engineering |
5 |
| KM-express: an integrated online patient survival and gene expression analysis tool for the identification and functional characterization of prognostic markers in breast and prostate cancers |
5 |
| YeasTSS: an integrative web database of yeast transcription start sites |
5 |
| The NCBI BioCollections Database |
5 |
| StraPep: a structure database of bioactive peptides |
5 |
| PVCbase: an integrated web resource for the PVC bacterial proteomes |
5 |
| AutismKB 2.0: a knowledgebase for the genetic evidence of autism spectrum disorder |
5 |
| The COMPARE Data Hubs |
5 |
| Maser: one-stop platform for NGS big data from analysis to visualization |
5 |
| RHPCG: a database of the Regulation of the Hippo Pathway in Cancer Genome |
5 |
| MSGP: the first database of the protein components of the mammalian stress granules |
5 |
| ZFLNC: a comprehensive and well-annotated database for zebrafish lncRNA |
5 |
| The MACADAM database: a MetAboliC pAthways DAtabase for Microbial taxonomic groups for mining potential metabolic capacities of archaeal and bacterial taxonomic groups |
5 |
| Micropublication: incentivizing community curation and placing unpublished data into the public domain |
4 |
| Meta-omics data and collection objects (MOD-CO): a conceptual schema and data model for processing sample data in meta-omics research |
4 |
| IncSLdb: a resource for long non-coding RNA subcellular localization |
4 |
| PRRDB 2.0: a comprehensive database of pattern-recognition receptors and their ligands |
4 |
| RAACBook: a web server of reduced amino acid alphabet for sequence-dependent inference by using Chou's five-step rule |
4 |
| ZincBind-the database of zinc binding sites |
4 |
| AntiTbPdb: a knowledgebase of anti-tubercular peptides |
4 |
| CellExpress: a comprehensive microarray-based cancer cell line and clinical sample gene expression analysis online system |
4 |
| A survey of ontology learning techniques and applications |
4 |
| Enhanced taxonomy annotation of antiviral activity data from ChEMBL |
4 |
