Biodata Mining

Biodata Mining

生物数据挖掘

  • 3区 中科院分区
  • Q1 JCR分区

高引用文章

文章名称 引用次数
Gene set analysis methods: a systematic comparison 11
Encodings and models for antimicrobial peptide classification for multi-resistant pathogens 10
Investigating the parameter space of evolutionary algorithms 8
Knomics-Biota - a system for exploratory analysis of human gut microbiota data 8
Combining DNA methylation and RNA sequencing data of cancer for supervised knowledge extraction 7
PathCORE-T: identifying and visualizing globally co-occurring pathways in large transcriptomic compendia 5
Use case driven evaluation of open databases for pediatric cancer research 5
ViSEAGO: a Bioconductor package for clustering biological functions using Gene Ontology and semantic similarity 5
Grasping frequent subgraph mining for bioinformatics applications 4
Connecting genetics and gene expression data for target prioritisation and drug repositioning 4
Protein folding prediction in the HP mode using ions motion optimization with a greedy algorithm 3
SEQdata-BEACON: a comprehensive database of sequencing performance and statistical tools for performance evaluation and yield simulation in BGISEQ-500 3
Characterizing the effects of missing data and evaluating imputation methods for chemical prioritization applications using ToxPi 3
A multi-objective gene clustering algorithm guided by apriori biological knowledge with intensification and diversification strategies 3
Confounding of linkage disequilibrium patterns in large scale DNA based gene-gene interaction studies 3
Predicting opioid dependence from electronic health records with machine learning 3
A fast forward 3D connection algorithm for mitochondria and synapse segmentations from serial EM images 2
Application of an interpretable classification model on Early Folding Residues during protein folding 2
TRIQ: a new method to evaluate triclusters 2
Improving machine learning reproducibility in genetic association studies with proportional instance cross validation (PICV) 2
Disease associations depend on visit type: results from a visit-wide association study 2
Transition-transversion encoding and genetic relationship metric in ReliefF feature selection improves pathway enrichment in GWAS 2
Within-sample co-methylation patterns in normal tissues 1
Screening for mouse genes lost in mammals with long lifespans 1
ClickGene: an open cloud-based platform for big pan-cancer data genome-wide association study, visualization and exploration 1
Distributed retrieval engine for the development of cloud-deployed biological databases 1
Integrative analysis of gene expression and methylation data for breast cancer cell lines 1
Soft document clustering using a novel graph covering approach 1
Functional relevance for central cornea thickness-associated genetic variants by using integrative analyses 1
On the utilization of deep and ensemble learning to detect milk adulteration 1
Integrative analysis of genetic and epigenetic profiling of lung squamous cell carcinoma (LSCC) patients to identify smoking level relevant biomarkers 1
Innovative strategies for annotating the relationSNP between variants and molecular phenotypes 1
Pairwise gene GO-based measures for biclustering of high-dimensional expression data 1
Feature selection for gene prediction in metagenomic fragments 1
Predicting metabolite-disease associations based on KATZ model 1
Measuring associations between the microbiota and repeated measures of continuous clinical variables using a lasso-penalized generalized linear mixed model 1
Collective feature selection to identify crucial epistatic variants 1
Approximate kernel reconstruction for time-varying networks 0
Characterizing human genomic coevolution in locus-gene regulatory interactions 0
Exploration of a diversity of computational and statistical measures of association for genome-wide genetic studies 0
Evolutionary methods for variable selection in the epidemiological modeling of cardiovascular diseases 0
RNSCLC-PRSP software to predict the prognostic risk and survival in patients with resected T1-3N0-2M0 non-small cell lung cancer 0
A novel joint analysis framework improves identification of differentially expressed genes in cross disease transcriptomic analysis 0
A biplot correlation range for group-wise metabolite selection in mass spectrometry 0
Identification of influential observations in high-dimensional cancer survival data through the rank product test 0
Unified Cox model based multifactor dimensionality reduction method for gene-gene interaction analysis of the survival phenotype 0