| American Gut: an Open Platform for Citizen Science Microbiome Research |
59 |
| New Insights into Human Nostril Microbiome from the Expanded Human Oral Microbiome Database (eHOMD): a Resource for the Microbiome of the Human Aerodigestive Tract |
53 |
| Phylogenetically Novel Uncultured Microbial Cells Dominate Earth Microbiomes |
47 |
| Evaluating the Information Content of Shallow Shotgun Metagenomics |
39 |
| Phylogenetic Placement of Exact Amplicon Sequences Improves Associations with Clinical Information |
32 |
| Age- and Sex-Dependent Patterns of Gut Microbial Diversity in Human Adults |
31 |
| Quantifying and Understanding Well-to-Well Contamination in Microbiome Research |
28 |
| A Metagenomic Meta-analysis Reveals Functional Signatures of Health and Disease in the Human Gut Microbiome |
28 |
| Is Host Filtering the Main Driver of Phylosymbiosis across the Tree of Life? |
28 |
| Balances: a New Perspective for Microbiome Analysis |
26 |
| Salinity Is a Key Determinant for Soil Microbial Communities in a Desert Ecosystem |
25 |
| Development of the Human Mycobiome over the First Month of Life and across Body Sites |
24 |
| A Prospective Metagenomic and Metabolomic Analysis of the Impact of Exercise and/or Whey Protein Supplementation on the Gut Microbiome of Sedentary Adults |
24 |
| q2-longitudinal: Longitudinal and Paired-Sample Analyses of Microbiome Data |
23 |
| Soil Viruses Are Underexplored Players in Ecosystem Carbon Processing |
22 |
| A Novel Sparse Compositional Technique Reveals Microbial Perturbations |
20 |
| Asymptomatic Intestinal Colonization with Protist Blastocystis Is Strongly Associated with Distinct Microbiome Ecological Patterns |
20 |
| On the Road to Strain-Resolved Comparative Metagenomics |
19 |
| KatharoSeq Enables High-Throughput Microbiome Analysis from Low-Biomass Samples |
19 |
| Controlling for Contaminants in Low-Biomass 16S rRNA Gene Sequencing Experiments |
19 |
| Performance of Microbiome Sequence Inference Methods in Environments with Varying Biomass |
17 |
| Gut Microbiota Offers Universal Biomarkers across Ethnicity in Inflammatory Bowel Disease Diagnosis and Infliximab Response Prediction |
17 |
| Alterations in Gut Glutamate Metabolism Associated with Changes in Gut Microbiota Composition in Children with Autism Spectrum Disorder |
17 |
| New Approaches to Microbiome-Based Therapies |
16 |
| Designing Metabolic Division of Labor in Microbial Communities |
15 |
| Core Microbiota in Agricultural Soils and Their Potential Associations with Nutrient Cycling |
15 |
| Nonpareil 3: Fast Estimation of Metagenomic Coverage and Sequence Diversity |
15 |
| Interaction between Host MicroRNAs and the Gut Microbiota in Colorectal Cancer |
15 |
| Holistic Assessment of Rumen Microbiome Dynamics through Quantitative Metatranscriptomics Reveals Multifunctional Redundancy during Key Steps of Anaerobic Feed Degradation |
15 |
| Ultrahigh-Throughput Multiplexing and Sequencing of >500-Base-Pair Amplicon Regions on the Illumina HiSeq 2500 Platform |
15 |
| Linking Nitrogen Load to the Structure and Function of Wetland Soil and Rhizosphere Microbial Communities |
15 |
| Multi-omits Signature of Candida auris, an Emerging and Multidrug-Resistant Pathogen |
15 |
| A Multi-omits Approach to Unraveling the Microbiome-Mediated Effects of Arabinoxylan Oligosaccharides in Overweight Humans |
15 |
| Marine Sponges as Chloroflexi Hot Spots: Genomic Insights and High-Resolution Visualization of an Abundant and Diverse Symbiotic Clade |
14 |
| Metaproteomics: Much More than Measuring Gene Expression in Microbial Communities |
14 |
| Longitudinal Microbiome Composition and Stability Correlate with Increased Weight and Length of Very-Low-Birth-Weight Infants |
14 |
| Antimicrobial Chemicals Associate with Microbial Function and Antibiotic Resistance Indoors |
14 |
| Using Core Genome Alignments To Assign Bacterial Species |
14 |
| Probiotic Bifidobacterium lactis V9 Regulates the Secretion of Sex Hormones in Polycystic Ovary Syndrome Patients through the Gut-Brain Axis |
14 |
| Fecal Microbiota Transplantation Beneficially Regulates Intestinal Mucosal Autophagy and Alleviates Gut Barrier Injury |
14 |
| Gut Microbiota Has a Widespread and Modifiable Effect on Host Gene Regulation |
13 |
| Intermittent Hypoxia and Hypercapnia, a Hallmark of Obstructive Sleep Apnea, Alters the Gut Microbiome and Metabolome |
13 |
| Exploring Linkages between Taxonomic and Functional Profiles of the Human Microbiome |
13 |
| Butyrate Producers as Potential Next-Generation Probiotics: Safety Assessment of the Administration of Butyricicoccus pullicaecorum to Healthy Volunteers |
13 |
| Evaluating Metagenomic Prediction of the Metaproteome in a 4.5-Year Study of a Patient with Crohn's Disease |
12 |
| From Network Analysis to Functional Metabolic Modeling of the Human Gut Microbiota |
12 |
| A Cultural Renaissance: Genomics Breathes New Life into an Old Craft |
12 |
| Understanding Human-Virus Protein-Protein Interactions Using a Human Protein Complex-Based Analysis Framework |
11 |
| Transcriptionally Active Lung Microbiome and Its Association with Bacterial Biomass and Host Inflammatory Status |
11 |
| Omics-Based Insights into Flavor Development and Microbial Succession within Surface-Ripened Cheese |
11 |
