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Core promoter in TNBC is highly mutated with rich ethnic signature
Author: Huang, Teng; Li, Jiaheng; Zhao, Heng; Ngamphiw, Chumpol; Tongsima, Sissades; Kantaputra, Piranit; Kittitharaphan, Wiranpat; Wang, San Ming
Journal: BRIEFINGS IN FUNCTIONAL GENOMICS. 2023; Vol. 22, Issue 1, pp. 9-19. DOI: 10.1093/bfgp/elac035
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Attention-based GCN integrates multi-omics data for breast cancer subtype classification and patient-specific gene marker identification
Author: Guo, Hui; Lv, Xiang; Li, Yizhou; Li, Menglong
Journal: BRIEFINGS IN FUNCTIONAL GENOMICS. 2023; Vol. , Issue , pp. -. DOI: 10.1093/bfgp/elad013
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iEnhancer-SKNN: a stacking ensemble learning-based method for enhancer identification and classification using sequence information
Author: Wu, Hao; Liu, Mengdi; Zhang, Pengyu; Zhang, Hongming
Journal: BRIEFINGS IN FUNCTIONAL GENOMICS. 2023; Vol. , Issue , pp. -. DOI: 10.1093/bfgp/elac057
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AAFL: automatic association feature learning for gene signature identification of cancer subtypes in single-cell RNA-seq data
Author: Huang, Meng; Long, Changzhou; Ma, Jiangtao
Journal: BRIEFINGS IN FUNCTIONAL GENOMICS. 2023; Vol. , Issue , pp. -. DOI: 10.1093/bfgp/elac047
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ncRNALocate-EL: a multi-label ncRNA subcellular locality prediction model based on ensemble learning
Author: Bai, Tao; Liu, Bin
Journal: BRIEFINGS IN FUNCTIONAL GENOMICS. 2023; Vol. , Issue , pp. -. DOI: 10.1093/bfgp/elad007
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MiRNA-gene network embedding for predicting cancer driver genes
Author: Peng, Wei; Wu, Rong; Dai, Wei; Ning, Yu; Fu, Xiaodong; Liu, Li; Liu, Lijun
Journal: BRIEFINGS IN FUNCTIONAL GENOMICS. 2023; Vol. , Issue , pp. -. DOI: 10.1093/bfgp/elac059
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An improved hierarchical variational autoencoder for cell-cell communication estimation using single-cell RNA-seq data
Author: Liu, Shuhui; Zhang, Yupei; Peng, Jiajie; Shang, Xuequn
Journal: BRIEFINGS IN FUNCTIONAL GENOMICS. 2023; Vol. , Issue , pp. -. DOI: 10.1093/bfgp/elac056
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Detecting early-warning signals for influenza by dysregulated dynamic network biomarkers
Author: Huo, Yanhao; Li, Chuchu; Li, Yujie; Li, Xianbin; Xu, Peng; Bao, Zhenshen; Liu, Wenbin
Journal: BRIEFINGS IN FUNCTIONAL GENOMICS. 2023; Vol. , Issue , pp. -. DOI: 10.1093/bfgp/elad006