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A graph neural network-based interpretable framework reveals a novel DNA fragility-associated chromatin structural unit
Author: Sun, Yu; Xu, Xiang; Lin, Lin; Xu, Kang; Zheng, Yang; Ren, Chao; Tao, Huan; Wang, Xu; Zhao, Huan; Tu, Weiwei; Bai, Xuemei; Wang, Junting; Huang, Qiya; Li, Yaru; Chen, Hebing; Li, Hao; Bo, Xiaochen
Journal: GENOME BIOLOGY. 2023; Vol. 24, Issue 1, pp. -. DOI: 10.1186/s13059-023-02916-x
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A desert lncRNA HIDEN regulates human endoderm differentiation via interacting with IMP1 and stabilizing FZD5 mRNA
Author: Lu, Pei; Yang, Jie; Li, Mao; Wen, Shanshan; Zhang, Tianzhe; Yan, Chenchao; Liu, Ran; Xiao, Yu; Wang, Xinghuan; Jiang, Wei
Journal: GENOME BIOLOGY. 2023; Vol. 24, Issue 1, pp. -. DOI: 10.1186/s13059-023-02925-w
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Identifying yield-related genes in maize based on ear trait plasticity
Author: Liu, Minguo; Zhang, Shuaisong; Li, Wei; Zhao, Xiaoming; Wang, Xi-Qing
Journal: GENOME BIOLOGY. 2023; Vol. 24, Issue 1, pp. -. DOI: 10.1186/s13059-023-02937-6
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MetaBinner: a high-performance and stand-alone ensemble binning method to recover individual genomes from complex microbial communities
Author: Wang, Ziye; Huang, Pingqin; You, Ronghui; Sun, Fengzhu; Zhu, Shanfeng
Journal: GENOME BIOLOGY. 2023; Vol. 24, Issue 1, pp. -. DOI: 10.1186/s13059-022-02832-6
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Single-cell transcriptomics unveils xylem cell development and evolution
Author: Tung, Chia-Chun; Kuo, Shang-Che; Yang, Chia-Ling; Yu, Jhong-He; Huang, Chia-En; Liou, Pin-Chien; Sun, Ying-Hsuan; Shuai, Peng; Su, Jung-Chen; Ku, Chuan; Lin, Ying-Chung Jimmy
Journal: GENOME BIOLOGY. 2023; Vol. 24, Issue 1, pp. -. DOI: 10.1186/s13059-022-02845-1
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Dynamic chromatin regulatory programs during embryogenesis of hexaploid wheat
Author: Zhao, Long; Yang, Yiman; Chen, Jinchao; Lin, Xuelei; Zhang, Hao; Wang, Hao; Wang, Hongzhe; Bie, Xiaomin; Jiang, Jiafu; Feng, Xiaoqi; Fu, Xiangdong; Zhang, Xiansheng; Du, Zhuo; Xiao, Jun
Journal: GENOME BIOLOGY. 2023; Vol. 24, Issue 1, pp. -. DOI: 10.1186/s13059-022-02844-2
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Enhanced RNA knockdown efficiency with engineered fusion guide RNAs that function with both CRISPR-CasRx and hammerhead ribozyme
Author: Zhan, Yonghao; Cao, Congcong; Li, Aolin; Mei, Hongbing; Liu, Yuchen
Journal: GENOME BIOLOGY. 2023; Vol. 24, Issue 1, pp. -. DOI: 10.1186/s13059-023-02852-w
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Doxycycline-dependent Cas9-expressing pig resources for conditional in vivo gene nullification and activation
Author: Jin, Qin; Liu, Xiaoyi; Zhuang, Zhenpeng; Huang, Jiayuan; Gou, Shixue; Shi, Hui; Zhao, Yu; Ouyang, Zhen; Liu, Zhaoming; Li, Lei; Mao, Junjie; Ge, Weikai; Chen, Fangbing; Yu, Manya; Guan, Yezhi; Ye, Yinghua; Tang, Chengcheng; Huang, Ren; Wang, Kepin; Lai, Liangxue
Journal: GENOME BIOLOGY. 2023; Vol. 24, Issue 1, pp. -. DOI: 10.1186/s13059-023-02851-x
